| tation | When | Services |
| olspan=3 align=center|Queens |
| a href="/encyclopedia/Astoria-Ditmars-Boulevard-(BMT-Astoria-Line-station)" title="Astoria-Ditmars Boulevard (BMT Astoria Line station)">Astoria-Ditmars Boulevard | always | |
| a href="/encyclopedia/Astoria-Boulevard-(BMT-Astoria-Line-station)" title="Astoria Boulevard (BMT Astoria Line station)">Astoria Boulevard | always | |
| a href="/encyclopedia/30th-Avenue-(BMT-Astoria-Line-station)" title="30th Avenue (BMT Astoria Line station)">30th Avenue | always | |
| a href="/encyclopedia/Broadway-(BMT-Astoria-Line-station)" title="Broadway (BMT Astoria Line station)">Broadway | always | |
| a href="/encyclopedia/36th-Avenue-(BMT-Astoria-Line-station)" title="36th Avenue (BMT Astoria Line station)">36th Avenue | always | |
| a href="/encyclopedia/39th-Avenue-(BMT-Astoria-Line-station)" title="39th Avenue (BMT Astoria Line station)">39th Avenue | always | |
| a href="/encyclopedia/Queensboro-Plaza-(BMT-Astoria-Line-station)" title="Queensboro Plaza (BMT Astoria Line station)">Queensboro Plaza | always | |
| olspan=3 align=center|Manhattan |
| a href="/encyclopedia/Lexington-Avenue-59th-Street-(BMT-Broadway-Line-station)" title="Lexington Avenue-59th Street (BMT Broadway Line station)">Lexington Avenue-59th Street | always | (MetroCard) Roosevelt Island Tramway |
| a href="/encyclopedia/Fifth-Avenue-59th-Street-(BMT-Broadway-Line-station)" title="Fifth Avenue-59th Street (BMT Broadway Line station)">Fifth Avenue-59th Street | always | |
| a href="/encyclopedia/57th-Street-(BMT-Broadway-Line-station)" title="57th Street (BMT Broadway Line station)">57th Street | always | |
| a href="/encyclopedia/49th-Street-(BMT-Broadway-Line-station)" title="49th Street (BMT Broadway Line station)">49th Street | always | |
| a href="/encyclopedia/42nd-Street-Times-Square-(BMT-Broadway-Line-station)" title="42nd Street-Times Square (BMT Broadway Line station)">42nd Street-Times Square | always | Port Authority Bus Terminal |
| a href="/encyclopedia/34th-Street-Herald-Square-(BMT-Broadway-Line-station)" title="34th Street-Herald Square (BMT Broadway Line station)">34th Street-Herald Square | always | |
| gcolor=bfbfbf|28th Street | late nights and weekends only | |
| gcolor=bfbfbf|23rd Street | late nights and weekends only | |
| a href="/encyclopedia/14th-Street-Union-Square-(BMT-Broadway-Line-station)" title="14th Street-Union Square (BMT Broadway Line station)">14th Street-Union Square | always | |
| gcolor=bfbfbf|Eighth Street-NYU | late nights and weekends only | |
| gcolor=bfbfbf|Prince Street | late nights and weekends only | |
| olspan=3 align=center|trains via lower Manhattan (night service) leave here |
| a href="/encyclopedia/Canal-Street-(BMT-Manhattan-Bridge-Line-station)" title="Canal Street (BMT Manhattan Bridge Line station)">Canal Street | all but late nights | |
| olspan=3 align=center|Brooklyn |
| olspan=3 align=center|trains via lower Manhattan (night service) enter here |
| gcolor=bfbfbf|DeKalb Avenue | late nights only | |
| a href="/encyclopedia/Pacific-Street-(BMT-Fourth-Avenue-Line-station)" title="Pacific Street (BMT Fourth Avenue Line station)">Pacific Street | always | |
| gcolor=bfbfbf|Union Street | late nights only | |
| gcolor=bfbfbf|Ninth Street | late nights only | |
| gcolor=bfbfbf|Prospect Avenue | late nights only | |
| gcolor=bfbfbf|25th Street | late nights only | |
| a href="/encyclopedia/36th-Street-(BMT-Fourth-Avenue-Line-station)" title="36th Street (BMT Fourth Avenue Line station)">36th Street | always | |
| gcolor=bfbfbf|45th Street | late nights only | |
| gcolor=bfbfbf|53rd Street | late nights only | |
| a href="/encyclopedia/59th-Street-(BMT-Fourth-Avenue-Line-station)" title="59th Street (BMT Fourth Avenue Line station)">59th Street | always | |
| a href="/encyclopedia/Eighth-Avenue-(BMT-Sea-Beach-Line-station)" title="Eighth Avenue (BMT Sea Beach Line station)">Eighth Avenue | always | |
| a href="/encyclopedia/Fort-Hamilton-Parkway-(BMT-Sea-Beach-Line-station)" title="Fort Hamilton Parkway (BMT Sea Beach Line station)">Fort Hamilton Parkway | always | |
| a href="/encyclopedia/New-Utrecht-Avenue-(BMT-Sea-Beach-Line-station)" title="New Utrecht Avenue (BMT Sea Beach Line station)">New Utrecht Avenue | always | |
| a href="/encyclopedia/18th-Avenue-(BMT-Sea-Beach-Line-station)" title="18th Avenue (BMT Sea Beach Line station)">18th Avenue | always | |
| a href="/encyclopedia/20th-Avenue-(BMT-Sea-Beach-Line-station)" title="20th Avenue (BMT Sea Beach Line station)">20th Avenue | always | |
| a href="/encyclopedia/Bay-Parkway-(BMT-Sea-Beach-Line-station)" title="Bay Parkway (BMT Sea Beach Line station)">Bay Parkway | always | |
| a href="/encyclopedia/Kings-Highway-(BMT-Sea-Beach-Line-station)" title="Kings Highway (BMT Sea Beach Line station)">Kings Highway | always | |
| a href="/encyclopedia/Avenue-U-(BMT-Sea-Beach-Line-station)" title="Avenue U (BMT Sea Beach Line station)">Avenue U | always | |
| a href="/encyclopedia/Gravesend-86th-Street-(BMT-Sea-Beach-Line-station)" title="Gravesend-86th Street (BMT Sea Beach Line station)">Gravesend-86th Street | always | |
| olspan=3 align=center|via lower Manhattan (night service) (Manhattan) |
| gcolor=bfbfbf|Canal Street | late nights only | |
| gcolor=bfbfbf|City Hall | late nights only | |
| gcolor=bfbfbf|Cortlandt Street | late nights only | |
| gcolor=bfbfbf|Rector Street | late nights only | |
| gcolor=bfbfbf|Whitehall Street | late nights only | Staten Island Ferry |
| olspan=3 align=center|Brooklyn |
| gcolor=bfbfbf|Court Street-Borough Hall | late nights only | |
| gcolor=bfbfbf|Lawrence Street | late nights only |